Publications – Northwestern Proteomics

Publications (Over 450)

The experts of Northwestern Proteomics are also members of the Kelleher Research Group. Projects focus on five major areas of research: Top-Down Proteomics, Histones and Cell Biology, Informatics, Native Proteomics, and Natural Products Discovery!

Below is a list of the Top 10 publications by Neil Kelleher, Ph.D. and team

Click here to view the full list of publications!

Caesar LK, Butun FA, Robey MT, Ayon NJ, Gupta R, Dainko D, Bok JW, Nickles G, Stankey RJ, Johnson D, Mead D, Cank KB, Earp CE, Raja HA, Oberlies NH, Keller NP, Kelleher NL. “Correlative metabologenomics of 110 fungi reveals metabolite-gene cluster pairs”, Nat. Chem. Biol., 2023, 19(7):846-854.
Kafader JO, Melani RD, Durbin KR, Ikwuagwu B, Early BP, Fellers RT, Beu SC, Zabrouskov V, Makarov AA, Maze JT, Shinholt DL, Yip PF, Tullman-Ercek D, Senko MW, Compton PD, Kelleher NL. “Multiplexed mass spectrometry of individual ions improves measurement of proteoforms and their complexes”, Nat. Methods, 2020, 17(4), 391-394.
Smith, L.M., Kelleher, N.L. “Proteoforms as the next proteomics currency”, Science, 2018, 359(6380):1106-1107.
Meng F, Cargile BJ, Miller LM, Forbes AJ, Johnson JR, Kelleher NL. “Informatics and multiplexing of intact protein identification in bacteria and the archaea”, Nat. Biotechnol., 2001, 19(10):952-7.
Tran JC, Zamdborg L, Ahlf DR, Lee JE, Catherman AD, Durbin KR, Tipton JD, Vellaichamy A, Kellie JF, Li M, Wu C, Sweet SM, Early BP, Siuti N, LeDuc RD, Compton PD, Thomas PM, Kelleher NL. “Mapping intact protein isoforms in discovery mode using top-down proteomics”, Nature, 2011, 480(7376):254-8.
Smith LM, Kelleher NL; Consortium for Top Down Proteomics. “Proteoform: a single term describing protein complexity”, Nat. Methods, 2013, 10(3), 186-187.
Kelleher NL. “A cell-based approach to the human proteome project”, J. Am. Soc. Mass Spectrom., 2012, 23(10):1617-24.
Belov ME, Damoc E, Denisov E, Compton PD, Horning S, Makarov AA, Kelleher NL. “From protein complexes to subunit backbone fragments: a multi-stage approach to native mass spectrometry”, Anal. Chem., 2013, 85(23):11163-73.
LeDuc RD, Fellers RT, Early BP, Greer JB, Shams DP, Thomas PM, Kelleher NL. “Accurate Estimation of Context-Dependent False Discovery Rates in Top-Down Proteomics”, Mol. Cell Proteomics, 2019, 18(4):796-805.
Skinner OS, Haverland NA, Fornelli L, Melani RD, Do Vale LHF, Seckler HS, Doubleday PF, Schachner LF, Srzentić K, Kelleher NL, Compton PD. “Top-down characterization of endogenous protein complexes with native proteomics”, Nat. Chem. Biol., 2017, 14(1):36-41.

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